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Nucleic Acids and Protein Synthesis
- All functions of a cell are directed from some central form
of information.
- This "biological program" is called the Genetic
Code. - The way cell store information regarding it's structure and function.
History
For years the source of heredity was unknown. This was
resolved after numerous studies and experimental research by the following researchers:
- Fredrick Griffith

- He was studying effects of 2 strains of an infectious
bacteria, the "smooth" strain was found to cause pneumonia & death in mice.
The "rough" strain did not. He conducted the following experiment:
| Bacteria Strain
injected into mouse |
Result |
| Smooth Strain |
Mouse dies |
| Rough strain |
Mouse Lives |
| Heat-Killed Smooth strain |
Mouse lives |
| Rough Strain & Heat
killed smooth strain |
*MOUSE DIES* |
- The last condition was unusual, as he predicted that the
mouse should live
- Concluded that some unknown substance was Transforming
the rough strain into the smooth one
- Avery, McCarty & MacLeod
- Tried to determine the nature of this transforming agent. Eg.
Was it protein or DNA?
- Degraded chromosomes with enzymes which destroyed proteins or
DNA
- Samples with Proteins destroyed would still cause
transformation in bacteria indicating genetic material was DNA

3. Hershey-Chase
- 1 virus was "tagged" with 32P on it's
DNA
- The other was "tagged" 35S on it's
protein coat.
- Researchers found the radioactive P in the bacteria, indicating
it is DNA, not protein being injected into bacteria.

- Watson & Crick
- The constituents of DNA had long been known. Structure of
DNA, however was not.
- In 1953, Watson & Crick published findings based on X-ray
analysis and other data that DNA was in the form of a "Double Helix".
- Their findings show us the basic structure of DNA which is as
follows.
DNA Structure
DNA is Formed of in a "Double Helix"
- like a spiral staircase.

DNA Molecule-note
"double helix" shape
- DNA is formed by Nucleotides
- These are made from 3 components
- A 5-Carbon Sugar
- A Nitrogenous base
- A Phosphate group

- For DNA There are 4 different Nucleotides categorized as
either Purines or Pyramidines. These are usually represented
by a letter. These Are:
- Adenine (A)
- Cytosine (C)
- Guanine (G)
- Thymine (T)

- Each "Rung" of the DNA "staircase" is
formed by the linking of 2 Nucleotides through Hydrogen Bonds.
- These Hydrogen bonds form only between specific Nucleotides.
This is known as Base Pairing. The rules are as follows:
- Adenine (A) will ONLY bond to Thymine (T) (by 2 hydrogen
bonds)
- Cytosine (C) will ONLY bond to Guanine (G) (by 3 hydrogen
bonds)
Central Dogma of genetics.
- Central Dogma holds that genetic information is expressed in
a specific order. This order is as follows:

Central Dogma
- There are some apparent exceptions to this.
- Retroviruses (eg. HIV) are able to synthesize DNA from RNA
DNA Replication
DNA has unique ability to make copies of itself
This is a major "driving force" of living things.
Does so through the process of DNA Replication.
Complex process
DNA "Unzips itself" forming two strands with an
exposed Nucleotide.
An nucleotide which forms the appropriate Base-pair bonds
with the exposed nucleotide. This is facilitated by the enzyme DNA Polymerase.
The process moves down the DNA molecule, and once complete,
results in two identical DNA strands.
Transcription proceeds continuously along the 5'® 3'
direction (This is called the leading strand)
Proceeds in fragments in the other direction (called the
lagging strand) in the following way
- RNA primer attached to a segment of the strand by enzyme primase.
- Transcription now continues in the 5'® 3' direction forming
an okazaki fragment. Until it reaches the next fragment.
- The two fragments are joined by DNA ligase

DNA Replication
RNA Transcription
The cell does not directly use DNA to control the function of
the cell.
DNA is too precious and must be kept protected within the
nucleus.
The Cell makes a working "Photocopy" of itself to
do the actual work of making proteins.
This copy is called Ribonucleic Acid or RNA.
RNA differs from DNA in several important ways.
- It is much smaller
- It is single-stranded
- It does NOT contain Thymine, but rather a new nucleotide
called Uracil which will bind to Adenine.

- RNA is produced through a process called RNA
Transcription.
- Similar to DNA Replication.
- Small area of DNA "Unzips" exposing Nucleotides
- This area is acted on by an enzyme called RNA
Polymerase, which binds nucleotides (using uracil) to their complimentary base
pair.
- This releases a long strand of Messenger RNA (mRNA)
which is an important component of protein synthesis.

RNA Transcription
Protein Synthesis & The Genetic Code
The Sequence of nucleotides in an mRNA strand determine the
sequence of amino acids in a protein
Process requires mRNA, tRNA & ribosomes.
mRNA
Each three Nucleotide sequence in an mRNA strand is called a
"Codon" Each Codon codes for a particular amino acid.
The codon sequence codes for an amino acid using specific
rules. These specific codon/amino acid pairings is called the Genetic Code.

tRNA
There is a special form of RNA called Transfer RNA or
tRNA.

tRNA
- Each tRNA has a 3 Nucleotide sequence on one end which is
known as the "Anitcodon"
- This Anticodon sequence is complimentary to the Codon
sequence found on the strand of mRNA
Each tRNA can bind specifically with a particular amino acid.
Ribosome
Consists of two subunits
Large subunit
Small subunit
Serves as a template or "work station" where
protein synthesis can occur.

Protein Synthesis
Protein synthesis is a complex, many step process, it is as
follows.
An mRNA strand binds to the large & small subunits of a
ribosome in the cytoplasm of the cell
- This occurs at the AUG (initiation) codon of the strand.
A tRNA molecule with an attached amino acid binds to the mRNA
strand.
- Note: This occurs with complimentary codons &
anti-codons.
Another tRNA binds to the adjacent codon of the mRNA
A peptide bond is formed between the amino acids
The first tRNA is released, and another tRNA binds next to
the second, another peptide bond is formed.
This process continues until a stop codon is reached.
The completed polypeptide is then released.


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Mr. Stanley
Last updated: March 11, 2004